PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00862.1.g00100.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family HSF
Protein Properties Length: 586aa    MW: 65792 Da    PI: 8.8305
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00862.1.g00100.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind101.76.4e-322483382101
                                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEE CS
                  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFk 82 
                                   Fl+k+++++ d++++ ++sw + gnsf+v+d++ fa  +Lp++Fkh+nf+SFvRQLn+YgF+k++ ++         weF+
  Zmw_sc00862.1.g00100.1.am.mk 248 FLTKTFDLVADPATDGVVSWGRAGNSFIVWDPHVFAAVLLPRFFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFA 319
                                   9****************************************************************999.........**** PP

                                   ESXXXXXXXXXXXXXXXXX CS
                  HSF_DNA-bind  83 hksFkkgkkellekikrkk 101
                                   +k F +g+++ll+ ikr++
  Zmw_sc00862.1.g00100.1.am.mk 320 NKGFLRGQRHLLRMIKRRR 338
                                   *****************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004157.6E-57244337IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.104.2E-36244337IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467855.85E-34244337IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004471.7E-29248337IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000566.5E-18248271IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000566.5E-18286298IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340287311IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000566.5E-18299311IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top